Web Client Disconnects From SQL Server - IIS Timing Out?

I am having a problem executing long running queries from an ASP application which connects to SQL Server 2000. Basically, I have batches of queries that are run using ADO in a loop written in VBScript. This works pretty well until the execution time of a single query starts to exceed some threshold, which I am trying to narrow down. I can typically run 2 - 10 queries in a loop, with the run time being anywhere from under a minute to an hour or more. Now that this application is being subjected to run against some large databases (25 - 40G), I'm having problems getting the application to continue beyond the first query if it takes a while to run.

I used SQL Profiler to try to diagnose what was going on. I can see the query executes to completion, but immediately after completing I can see an "Audit Logout" message, which apparently means that the client has disconnected. The query durations vary from 45 or 50 minutes to up to over 90 minutes. I have the ADO connection and query timeouts set to very large values, e.g. 1000 minutes, so I can't think its that. My guess is that there is some IIS setting or timeout that I am running up against and the connection to SQL Server is just dropped for some reason.

The configuration is

NT 4.0 SP6
SQL Server 2000 SP3
IIS 4.0
Explorer 5.5

I'm only running into this problem on the very largest databases we run against. The vast majority continue to function properly, but this is going to happen more often as time goes on the databases continue to grow in size.

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